Possible structures of homopurine-homopyrimidine S1-hypersensitive sites (Q35458067)

8 August 2017

title

Possible structures of homopurine-homopyrimidine S1-hypersensitive sites (English)

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8 August 2017

Cantor CR

1

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8 August 2017

Efstratiadis A

series ordinal

2

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8 August 2017

publication date

1 November 1984

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8 August 2017

language of work or name

English

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published in

Nucleic Acids Research

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8 August 2017

volume

12

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8 August 2017

issue

21

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8 August 2017

page(s)

8059-8072

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Conformational flexibility of DNA: polymorphism and handedness

8 August 2017

cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Energetics of B-to-Z transition in DNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Mapping of single-stranded regions in duplex DNA at the sequence level: single-strand-specific cytosine methylation in RNA polymerase-promoter complexes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

The sequence (dC-dA)n X (dG-dT)n forms left-handed Z-DNA in negatively supercoiled plasmids

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Poly(pyrimidine) . poly(purine) synthetic DNAs containing 5-methylcytosine form stable triplexes at neutral pH

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Detection of an altered DNA conformation at specific sites in chromatin and supercoiled DNA

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

A dominant role for DNA secondary structure in forming hypersensitive structures in chromatin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

57 Sequencing end-labeled DNA with base-specific chemical cleavages

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Action of nicking-closing enzyme on supercoiled and nonsupercoiled closed circular DNA: formation of a Boltzmann distribution of topological isomers

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Action of single-strand specific nucleases on model DNA heteroduplexes of defined size and sequence

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Conformational fluctuations of DNA helix

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Biochemical method for mapping mutational alterations in DNA with S1 nuclease: the location of deletions and temperature-sensitive mutations in simian virus 40

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Energetics of DNA twisting. II. Topoisomer analysis.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

DNA secondary structures: helices, wrinkles, and junctions

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Statistical mechanical analysis of competing conformational transitions in superhelical DNA.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

DNA supercoiling and its effects on DNA structure and function

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Conformation of promoter DNA: Fine mapping of S1-hypersensitive sites

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=320275

Visualization of an unwound DNA duplex

26 September 2018

1 reference

12 December 2020

Cruciform structures in supercoiled DNA

1 reference

12 December 2020

Theoretical analysis of competitive conformational transitions in torsionally stressed DNA

1 reference

12 December 2020

Stable cruciform formation at inverted repeat sequences in supercoiled DNA

1 reference

12 December 2020

Cruciform structures in palindromic DNA are favored by DNA supercoiling

1 reference

12 December 2020

Energetic and structural inter-relationship between DNA supercoiling and the right- to left-handed Z helix transitions in recombinant plasmids

1 reference

12 December 2020

Left-handed Z-DNA is induced by supercoiling in physiological ionic conditions

1 reference

12 December 2020

An altered DNA conformation detected by S1 nuclease occurs at specific regions in active chick globin chromatin

1 reference

12 December 2020

Facile transition of poly[d(TG)·d(CA)] into a left-handed helix in physiological conditions

1 reference

12 December 2020

Dynamic, Sequence-dependent DNA Structure as Exemplified by Cruciform Extrusion from Inverted Repeats in Negatively Supercoiled DNA

1 reference

12 December 2020

DNA formed by reassociation of complementary single-stranded circles from natural DNA is shown to contain left- and right-handed double helices

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12 December 2020

Left-handed DNA duplexes

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12 December 2020

Supercoiling and left-handed Z-DNA

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12 December 2020

Cruciform formation in a negatively supercoiled DNA may be kinetically forbidden under physiological conditions

1 reference

12 December 2020

Thermodynamics of the B–Z transition in superhelical DNA

1 reference

12 December 2020

Torsional rigidity of DNA and length dependence of the free energy of DNA supercoiling

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12 December 2020

DNA structural variations in the E. coli tyrT promoter

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/12.21.8059

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8 August 2017

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8 August 2017

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