From words to literature in structural proteomics (Q35084576)

6 August 2017

title

From words to literature in structural proteomics (English)

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6 August 2017

1

Andrej Sali

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author name string

Robert Glaeser

series ordinal

2

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6 August 2017

Thomas Earnest

series ordinal

3

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6 August 2017

Wolfgang Baumeister

series ordinal

4

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6 August 2017

publication date

1 March 2003

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6 August 2017

language of work or name

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6 August 2017

volume

422

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6 August 2017

issue

6928

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6 August 2017

page(s)

216-225

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publication type of scholarly work

6 August 2017

review article

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Macromolecular electron microscopy in the era of structural genomics

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https://api.crossref.org/works/10.1038%2FNATURE01513

Estimating the total number of protein folds

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YPD, PombePD and WormPD: model organism volumes of the BioKnowledge library, an integrated resource for protein information

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Comparative assessment of large-scale data sets of protein-protein interactions

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A comprehensive two-hybrid analysis to explore the yeast protein interactome

21 January 2018

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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

21 January 2018

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Functional organization of the yeast proteome by systematic analysis of protein complexes

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The third dimension for protein interactions and complexes.

21 January 2018

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Relating whole-genome expression data with protein-protein interactions

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Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae

21 January 2018

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The Protein Data Bank: unifying the archive

21 January 2018

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Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

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The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

21 January 2018

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Structure of the 30S ribosomal subunit

21 January 2018

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Crystal structure of the ribosome at 5.5 A resolution

21 January 2018

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Automation of X-ray crystallography

21 January 2018

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Structural genomics: beyond the human genome project

21 January 2018

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Completeness in structural genomics

21 January 2018

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Electron-crystallographic refinement of the structure of bacteriorhodopsin

21 January 2018

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Structure of the alpha beta tubulin dimer by electron crystallography

21 January 2018

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The structure of bacteriorhodopsin at 3.0 A resolution based on electron crystallography: implication of the charge distribution

21 January 2018

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Structural determinants of water permeation through aquaporin-1

21 January 2018

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Refined structure of alpha beta-tubulin at 3.5 A resolution

21 January 2018

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A giant protease with a twist: the TPP II complex from Drosophila studied by electron microscopy

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Leginon: an automated system for acquisition of images from vitreous ice specimens.

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Automated data collection with a Tecnai 12 electron microscope: applications for molecular imaging by cryomicroscopy.

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Automated Identification of Filaments in Cryoelectron Microscopy Images

21 January 2018

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Using situs for flexible and rigid-body fitting of multiresolution single-molecule data

21 January 2018

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Quantitative fitting of atomic models into observed densities derived by electron microscopy

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A complex prediction: three-dimensional model of the yeast exosome.

21 January 2018

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Electron tomography: towards visualizing the molecular organization of the cytoplasm

21 January 2018

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Electron tomography of molecules and cells

21 January 2018

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Toward detecting and identifying macromolecules in a cellular context: template matching applied to electron tomograms

21 January 2018

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Identification of macromolecular complexes in cryoelectron tomograms of phantom cells

21 January 2018

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Review: electron crystallography: present excitement, a nod to the past, anticipating the future

21 January 2018

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NMR analysis of a 900K GroEL GroES complex

21 January 2018

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An NMR approach to structural proteomics

21 January 2018

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21 January 2018

NMR in drug discovery

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Single-particle imaging of macromolecules by cryo-electron microscopy

21 January 2018

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A novel three-dimensional variant of the watershed transform for segmentation of electron density maps

21 January 2018

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The yeast nuclear pore complex: composition, architecture, and transport mechanism

21 January 2018

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A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Genomics, gene expression and DNA arrays

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Protein structure prediction and structural genomics

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Ab initio protein structure prediction: progress and prospects

21 January 2018

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Comparative protein structure modeling of genes and genomes

21 January 2018

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Structure-based evaluation of sequence comparison and fold recognition alignment accuracy

21 January 2018

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MODBASE, a database of annotated comparative protein structure models

21 January 2018

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Prediction of protein-protein interactions by docking methods.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Protein interaction maps for complete genomes based on gene fusion events

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

The use of gene clusters to infer functional coupling

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Co-evolution of proteins with their interaction partners

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

In silico two-hybrid system for the selection of physically interacting protein pairs

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

An evolutionary trace method defines binding surfaces common to protein families

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Interrogating protein interaction networks through structural biology

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Bridging structural biology and genomics: assessing protein interaction data with known complexes

21 January 2018

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In vivo veritas: electron cryotomography of cells

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

De Novo Prediction of Three-dimensional Structures for Major Protein Families

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Potential artefacts in protein-interaction networks

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Multi-resolution contour-based fitting of macromolecular structures

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Macromolecular Architecture in Eukaryotic Cells Visualized by Cryoelectron Tomography

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

Direct Determination of Changes of Interdomain Orientation on Ligation: Use of the Orientational Dependence of15N NMR Relaxation in Abl SH(32)†

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

Mapping by Site-Directed Mutagenesis of the Region Responsible for Cohesin−Dockerin Interaction on the Surface of the Seventh Cohesin Domain ofClostridium thermocellumCipA†

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

Protein complexes take the bait

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

21 January 2018

The society of proteins

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

Identification of in vivo substrates of the chaperonin GroEL

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

The Cell as a Collection of Protein Machines: Preparing the Next Generation of Molecular Biologists

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Estimating the total number of protein folds

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy

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https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Atomic model of plant light-harvesting complex by electron crystallography.

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https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopy.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Determination of the fold of the core protein of hepatitis B virus by electron cryomicroscopy

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Microtubule structure at 8 A resolution

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Combining Electron Microscopic with X-Ray Crystallographic Structures

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Prediction of the three-dimensional structure of Escherichia coli 30S ribosomal subunit: a molecular mechanics approach

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Structure of the 80S ribosome from Saccharomyces cerevisiae--tRNA-ribosome and subunit-subunit interactions

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Prospects of electron cryotomography to visualize macromolecular complexes inside cellular compartments: implications of crowding

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Electron Tomography of Ice-Embedded Prokaryotic Cells

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https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Perspectives of molecular and cellular electron tomography

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Determination of the interface of a large protein complex by transferred cross-saturation measurements

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

18 Systematic mutational analyses of protein-protein interfaces

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Structure from function: screening structural models with functional data

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Molecular docking programs successfully predict the binding of a beta-lactamase inhibitory protein to TEM-1 beta-lactamase

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Generating protein interaction maps from incomplete data: application to fold assignment

1 reference

https://api.crossref.org/works/10.1038%2FNATURE01513

7 January 2021

Identifiers

DOI

10.1038/NATURE01513

1 reference

6 August 2017

1 reference