Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins (Q35050170)

6 August 2017

title

Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins (English)

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6 August 2017

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M Gribskov

1

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6 August 2017

R R Burgess

series ordinal

2

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6 August 2017

publication date

1 August 1986

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6 August 2017

language of work or name

English

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published in

Nucleic Acids Research

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6 August 2017

volume

14

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6 August 2017

issue

16

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6 August 2017

page(s)

6745-6763

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The operator-binding domain of lambda repressor: structure and DNA recognition

6 August 2017

cites work

1 reference

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Nucleotide sequence of the lexA gene of E. coli

8 July 2018

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Multiple RNA polymerase holoenzymes exert transcriptional specificity in Bacillus subtilis

8 July 2018

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Enhanced graphic matrix analysis of nucleic acid and protein sequences

8 July 2018

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Defining a bacteriophage T4 late promoter: absence of a "-35" region

8 July 2018

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A comprehensive set of sequence analysis programs for the VAX

8 July 2018

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Structure of the cro repressor from bacteriophage lambda and its interaction with DNA.

8 July 2018

1 reference

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Bacteriophage SPO1 genes 33 and 34. Location and primary structure of genes encoding regulatory subunits of Bacillus subtilis RNA polymerase.

8 July 2018

1 reference

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Structure of a Bacillus subtilis bacteriophage SPO1 gene encoding RNA polymerase sigma factor

8 July 2018

1 reference

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Heat shock regulatory gene (htpR) of Escherichia coli is required for growth at high temperature but is dispensable at low temperature

8 July 2018

1 reference

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Defining a bacteriophage T4 late promoter: bacteriophage T4 gene 55 protein suffices for directing late promoter recognition

8 July 2018

1 reference

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Nncleotide sequence of thefnrgene and primary structure of the Fnr protein ofEschertchla coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

T4 late transcripts are initiated near a conserved DNA sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Sequence of galR gene indicates a common evolutionary origin of lac and gal repressor in Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Cloning and sequence of the crp gene of Escherichia coli K 12.

8 July 2018

1 reference

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Nucleotide sequence of the lexA gene of Escherichia coli K-12.

8 July 2018

1 reference

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Analysis of the Functional Components of the Phase Variation System

8 July 2018

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The nudeotide sequence of the cloned rpoD gene for the RNA polymerase sigma subunit from E. coil K12

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Structure of catabolite gene activator protein at 2.9 A resolution suggests binding to left-handed B-DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

8 July 2018

Protein-DNA recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Nucleotide sequence of the heat shock regulatory gene of E. coli suggests its protein product may be a transcription factor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Factor Stimulating Transcription by RNA Polymerase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

The Amino-Acid Sequence of lac Repressor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

ALT: a new factor involved in the synthesis of RNA by Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Genes 55, alpha gt, 47 and 46 of bacteriophage T4: the genomic organization as deduced by sequence analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

PEPPLOT, a protein secondary structure analysis program for the UWGCG sequence analysis software package

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Nucleotide sequence of the rpsU-dnaG-rpoD operon from Salmonella typhimurium and a comparison of this sequence with the homologous operon of Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Bacillus subtilis sigma factor sigma 29 is the product of the sporulation-essential gene spoIIG.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

DNA sequence of the bacteriophage gama cI gene

8 July 2018

1 reference

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Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Amino acid sequence of Cro regulatory protein of bacteriophage lambda

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Primary structure of an EcoRI fragment of λimm434 DNA containing regions cI-cro of phage 434 and cII-O of phage lambda

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

DNA sequence analysis of the transposon Tn3: Three genes and three sites involved in transposition of Tn3

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Purification and properties of the .sigma. subunit of Escherichia coli DNA-dependent RNA polymerase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Prediction of the Secondary Structure of Proteins from their Amino Acid Sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Nonspecific interactions of Escherichia coli RNA polymerase with native and denatured DNA: differences in the binding behavior of core and holoenzyme

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Nucleotide sequence of cro, cII and part of the O gene in phage λ DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Primary structure of the phage P22 repressor and its gene c2.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

A developmental gene product of Bacillus subtilis homologous to the sigma factor of Escherichia coli.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Nucleotide sequence of γδ resolvase gene and demonstration that its gene product acts as a repressor of transcription

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Is the amino acid but not the nucleotide sequence of the Escherichia coli araC gene conserved?

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Comparative size and properties of the sigma subunits of ribonucleic acid polymerase from Bacillus subtilis and Escherichia coli

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

A strong sequence homology exists between the major RNA polymerase sigma factors of Bacillus subtilis and Escherichia coli.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311678

Bacteriophage SP01 regulatory proteins directing late gene transcription in vitro

25 October 2018

1 reference

12 December 2020

Cascades of Sigma factors

1 reference

12 December 2020

Changes in the association between Bacillus subtilis RNA polymerase core and two specificity-determining subunits during transcription

1 reference

12 December 2020

Repressor structure and the mechanism of positive control

1 reference

12 December 2020

Marker rescue with plasmids bearing deletions in rpoD identifies a dispensable part of E. coli sigma factor

1 reference

12 December 2020

Overproduction and purification of a bacteriophage SPO1-encoded RNA polymerase sigma factor

1 reference

12 December 2020

The htpR gene product of E. coli is a sigma factor for heat-shock promoters

1 reference

12 December 2020

Mutations in the sigma subunit of E. coli RNA polymerase which affect positive control of transcription

1 reference

12 December 2020

Two functional domains conserved in major and alternate bacterial sigma factors

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/14.16.6745

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6 August 2017

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6 August 2017

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