Evaluating genome-scale approaches to eukaryotic DNA replication (Q34232735)

31 July 2017

title

Evaluating genome-scale approaches to eukaryotic DNA replication (English)

1 reference

31 July 2017

David M. Gilbert

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20811343

5 July 2024

publication date

1 September 2010

1 reference

31 July 2017

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=20811343

https://europepmc.org/articles/pmc2962615?pdf=render

5 July 2024

number of pages

12

1 reference

based on heuristic

inferred from page(s)

work available at URL

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20811343

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20811343/pdf/?tool=EBI

5 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20811343

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20811343/?tool=EBI

5 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20811343

https://europepmc.org/articles/PMC2962615

5 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20811343

https://europepmc.org/articles/PMC2962615?pdf=render

5 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20811343

https://doi.org/10.1038/nrg2830

5 July 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20811343

http://www.nature.com/articles/nrg2830.pdf

5 July 2024

1 reference

https://api.crossref.org/works/10.1038/NRG2830

http://www.nature.com/articles/nrg2830

5 July 2024

1 reference

https://api.crossref.org/works/10.1038/NRG2830

5 July 2024

published in

Nature Reviews Genetics

1 reference

31 July 2017

volume

11

1 reference

31 July 2017

issue

10

1 reference

31 July 2017

page(s)

673-684

1 reference

Comparative analysis of DNA replication timing reveals conserved large-scale chromosomal architecture.

31 July 2017

cites work

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6 July 2018

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Domain-wide regulation of DNA replication timing during mammalian development

6 July 2018

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Molecular analysis of the replication program in unicellular model organisms

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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In search of the holy replicator

6 July 2018

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6 July 2018

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Defined sequence modules and an architectural element cooperate to promote initiation at an ectopic mammalian chromosomal replication origin

6 July 2018

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6 July 2018

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Modular structure of the human lamin B2 replicator

6 July 2018

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DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding

6 July 2018

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Replication timing of the human genome

6 July 2018

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S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex

6 July 2018

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Sequence-independent DNA binding and replication initiation by the human origin recognition complex

6 July 2018

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Multiple functional elements comprise a Mammalian chromosomal replicator

6 July 2018

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Replication Initiation Patterns in the β-Globin Loci of Totipotent and Differentiated Murine Cells: Evidence for Multiple Initiation Regions

6 July 2018

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Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins.

6 July 2018

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Completion of Replication Map ofSaccharomyces cerevisiaeChromosome III

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Making sense of eukaryotic DNA replication origins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

The fission yeast homologue of Orc4p binds to replication origin DNA via multiple AT-hooks

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Replication Initiation Point Mapping

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Autonomous replication in human cells of multimers of specific human and bacterial DNA sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Autoradiography of chromosomal DNA fibers from Chinese hamster cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Temporal order of replication of Xenopus laevis 5S ribosomal RNA genes in somatic cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Bovine papilloma virus plasmids replicate randomly in mouse fibroblasts throughout S phase of the cell cycle

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Position effects on the timing of replication of chromosomally integrated simian virus 40 molecules in Chinese hamster cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Mathematical modelling of eukaryotic DNA replication.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Increased rate of human mutations where DNA and RNA polymerases collide

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Genome-organizing factors Top2 and Hmo1 prevent chromosome fragility at sites of S phase transcription.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Isolation of restriction fragments containing origins of replication from complex genomes

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Establishing the program of origin firing during S phase in fission Yeast.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

The relationship between DNA replication and human genome organization

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Multiplexed lipid dip-pen nanolithography on subcellular scales for the templating of functional proteins and cell culture

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Genome-wide localization of pre-RC sites and identification of replication origins in fission yeast

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Progressive activation of DNA replication initiation in large domains of the immunoglobulin heavy chain locus during B cell development

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

DNA replication origins fire stochastically in fission yeast

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Coordination of replication and transcription along a Drosophila chromosome.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Dynamics of DNA replication in mammalian somatic cells: nucleotide pool modulates origin choice and interorigin spacing

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Genome-wide DNA replication profile for Drosophila melanogaster: a link between transcription and replication timing

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Mapping of early firing origins on a replication profile of budding yeast

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Mapping Sites Where Replication Initiates in Mammalian Cells Using DNA Fibers

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2962615

Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae

28 October 2018

1 reference

Replication profile of Saccharomyces cerevisiae chromosome VI

31 March 2020

1 reference

Replication initiation point mapping: approach and implications

31 March 2020

1 reference

Association of fragile X syndrome with delayed replication of the FMR1 gene

31 March 2020

1 reference

The heterochromatin protein Swi6/HP1 activates replication origins at the pericentromeric region and silent mating-type locus

31 March 2020

1 reference

Heritable gene silencing in lymphocytes delays chromatid resolution without affecting the timing of DNA replication

31 March 2020

1 reference

Timing of Replication Is a Determinant of Neutral Substitution Rates but Does Not Explain Slow Y Chromosome Evolution in Rodents

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NRG2830

1 reference

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference