PASSEL: The PeptideAtlas SRMexperiment library (Q34154235)

31 July 2017

title

PASSEL: the PeptideAtlas SRMexperiment library (English)

1 reference

31 July 2017

PASSEL: The PeptideAtlas SRMexperiment library (English)

1 reference

https://api.crossref.org/works/10.1002/PMIC.201100515

24 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

24 December 2024

12

Ruedi Aebersold

1 reference

31 July 2017

2

Eric W Deutsch

1 reference

31 July 2017

7

Ulrike Kusebauch

1 reference

31 July 2017

9

Ruth Hüttenhain

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

24 December 2024

13

Robert L. Moritz

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

24 December 2024

author name string

Terry Farrah

1

1 reference

31 July 2017

Richard Kreisberg

3

1 reference

31 July 2017

Zhi Sun

4

1 reference

31 July 2017

Luis Mendoza

6

1 reference

31 July 2017

Mi-Youn Brusniak

8

1 reference

31 July 2017

Ralph Schiess

10

1 reference

31 July 2017

Nathalie Selevsek

11

1 reference

31 July 2017

David S. Campbell

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

24 December 2024

publication date

1 April 2012

1 reference

31 July 2017

April 2012

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=22318887

https://europepmc.org/articles/pmc3832291?pdf=render

24 December 2024

language of work or name

English

0 references

work available at URL

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

https://europepmc.org/articles/PMC3832291

24 December 2024

file format

HyperText Markup Language

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

https://europepmc.org/articles/PMC3832291?pdf=render

24 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

https://doi.org/10.1002/pmic.201100515

24 December 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22318887

https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2Fpmic.201100515

24 December 2024

1 reference

https://api.crossref.org/works/10.1002/PMIC.201100515

https://onlinelibrary.wiley.com/doi/full/10.1002/pmic.201100515

24 December 2024

1 reference

https://api.crossref.org/works/10.1002/PMIC.201100515

24 December 2024

1 reference

31 July 2017

volume

12

1 reference

31 July 2017

issue

8

1 reference

31 July 2017

page(s)

1170-1175

1 reference

TraML--a standard format for exchange of selected reaction monitoring transition lists

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

mProphet: automated data processing and statistical validation for large-scale SRM experiments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

mzML--a community standard for mass spectrometry data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Options and considerations when selecting a quantitative proteomics strategy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

A guided tour of the Trans-Proteomic Pipeline

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Automated detection of inaccurate and imprecise transitions in peptide quantification by multiple reaction monitoring mass spectrometry.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

High-throughput generation of selected reaction-monitoring assays for proteins and proteomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

MRMaid, the web-based tool for designing multiple reaction monitoring (MRM) transitions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Selected reaction monitoring for quantitative proteomics: a tutorial

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

MRMer, an interactive open source and cross-platform system for data extraction and visualization of multiple reaction monitoring experiments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

5 July 2018

The PeptideAtlas project

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

PRIDE: the proteomics identifications database

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Open source system for analyzing, validating, and storing protein identification data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

A common open representation of mass spectrometry data and its application to proteomics research

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Mass spectrometry-based proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3832291

Using the Human Plasma PeptideAtlas to Study Human Plasma Proteins

5 July 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100515

MRMaid-DB: a repository of published SRM transitions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100515

21 January 2018

Identifiers

1 reference

31 July 2017

1 reference

31 July 2017

1 reference