Interactions of mutant and wild-type flap endonucleases with oligonucleotide substrates suggest an alternative model of DNA binding (Q34064857)

30 July 2017

title

Interactions of mutant and wild-type flap endonucleases with oligonucleotide substrates suggest an alternative model of DNA binding (English)

1 reference

30 July 2017

Joe J Dervan

1

1 reference

30 July 2017

Min Feng

2

1 reference

30 July 2017

Dipak Patel

3

1 reference

30 July 2017

Jane A Grasby

4

1 reference

30 July 2017

Peter J Artymiuk

5

1 reference

30 July 2017

Thomas A Ceska

6

1 reference

30 July 2017

Jon R Sayers

7

1 reference

30 July 2017

publication date

1 June 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

language of work or name

English

0 references

published in

1 reference

30 July 2017

volume

99

1 reference

30 July 2017

issue

13

1 reference

30 July 2017

page(s)

8542-8547

1 reference

Unusually wide co-factor tolerance in a metalloenzyme; divalent metal ions modulate endo-exonuclease activity in T5 exonuclease

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Human flap endonuclease-1: conformational change upon binding to the flap DNA substrate and location of the Mg2+ binding site

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Comparison of the 5' nuclease activities of taq DNA polymerase and its isolated nuclease domain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

A single cleavage assay for T5 5'-->3' exonuclease: determination of the catalytic parameters forwild-type and mutant proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Mutagenesis of conserved lysine residues in bacteriophage T5 5'-3' exonuclease suggests separate mechanisms of endo-and exonucleolytic cleavage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

The crystal structure of flap endonuclease-1 from Methanococcus jannaschii

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Flexible loops and helical arches

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Structure-specific DNA binding by bacteriophage T5 5'-->3' exonuclease.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Prokaryotic 5'-3' exonucleases share a common core structure with gamma-delta resolvase.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Functional analysis of point mutations in human flap endonuclease-1 active site

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Conserved sites in the 5'-3' exonuclease domain of Escherichia coli DNA polymerase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

DNA structural elements required for FEN-1 binding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Crystal structure of Thermus aquaticus DNA polymerase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Properties of overexpressed phage T5 D15 exonuclease. Similarities with Escherichia coli DNA polymerase I 5'-3' exonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

A single-strand specific endonuclease activity copurifies with overexpressed T5 D15 exonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=124304

Flap endonuclease homologs in archaebacteria exist as independent proteins.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Contacts between the 5' nuclease of DNA polymerase I and its DNA substrate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Effect of flap modifications on human FEN1 cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Biochemical analysis of point mutations in the 5'-3' exonuclease of DNA polymerase I of Streptococcus pneumoniae. Functional and structural implications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Multiprotein reactions in mammalian DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Structure-Specific Endonucleolytic Cleavage of Nucleic Acids by Eubacterial DNA Polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Identification of Residues of T4 RNase H Required for Catalysis and DNA Binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Relationships between apparent binding energies measured in site-directed mutagenesis experiments and energetics of binding and catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.082241699

Rapid high-efficiency site-directed mutagenesis by the phosphorothioate approach

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12084915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.082241699

1 reference

release_s7toxzavkfhjfiacsmfngrfqgu

30 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/s7toxzavkfhjfiacsmfngrfqgu

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

124304

1 reference

30 July 2017

1 reference