An experimental assessment of in silico haplotype association mapping in laboratory mice (Q33517864)

27 July 2017

title

An experimental assessment of in silico haplotype association mapping in laboratory mice (English)

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27 July 2017

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Sarah L Burgess-Herbert

1

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27 July 2017

Shirng-Wern Tsaih

2

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27 July 2017

Ioannis M Stylianou

3

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27 July 2017

Kenneth Walsh

4

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27 July 2017

Allison J Cox

5

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27 July 2017

Beverly Paigen

6

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27 July 2017

publication date

9 December 2009

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27 July 2017

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27 July 2017

volume

10

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27 July 2017

page(s)

81

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Mouse genome-wide association mapping needs linkage analysis to avoid false-positive Loci

27 July 2017

cites work

1 reference

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Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci

21 June 2018

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Differences in DBA/1J and DBA/2J reveal lipid QTL genes

21 June 2018

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Quantitative trait loci for urinary albumin in crosses between C57BL/6J and A/J inbred mice in the presence and absence of Apoe

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Efficient control of population structure in model organism association mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

An imputed genotype resource for the laboratory mouse

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Prospects for association mapping in classical inbred mouse strains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Mouse Phenome Database (MPD)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

An integrated in silico gene mapping strategy in inbred mice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Complex genetic architecture revealed by analysis of high-density lipoprotein cholesterol in chromosome substitution strains and F2 crosses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Comparative analysis of haplotype association mapping algorithms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Bioinformatics toolbox for narrowing rodent quantitative trait loci

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Strategies for mapping and cloning quantitative trait genes in rodents

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Mapping quantitative trait loci using naturally occurring genetic variance among commercial inbred lines of maize (Zea mays L.).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

A high-resolution multistrain haplotype analysis of laboratory mouse genome reveals three distinctive genetic variation patterns

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Genetics of variation in HDL cholesterol in humans and mice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Mild spherocytosis and altered red cell ion transport in protein 4. 2-null mice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Molecular dissection of quantitative traits: progress and prospects

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Red cell membrane protein band 4.2: phenotypic, genetic and electron microscopic aspects

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

cDNA sequence, gene sequence, and properties of murine pallidin (band 4.2), the protein implicated in the murine pallid mutation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Empirical threshold values for quantitative trait mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Quantitative trait loci analysis of mice administered the methionine-choline deficient dietary model of experimental steatohepatitis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Quantitative trait loci for baseline erythroid traits.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Integrating QTL and high-density SNP analyses in mice to identify Insig2 as a susceptibility gene for plasma cholesterol levels

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Complement factor 5 is a quantitative trait gene that modifies liver fibrogenesis in mice and humans

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

Heritability, correlations and in silico mapping of locomotor behavior and neurochemistry in inbred strains of mice

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

In silico mapping of complex disease-related traits in mice.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

The Collaborative Cross, a community resource for the genetic analysis of complex traits

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2797012

In silico quantitative trait locus map for atherosclerosis susceptibility in apolipoprotein E-deficient mice

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20003225

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The gene encoding protein 4.2 is distinct from the mouse platelet storage pool deficiency mutation pallid

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20003225

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

GENEPOP (Version 1.2): Population Genetics Software for Exact Tests and Ecumenicism

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1093/OXFORDJOURNALS.JHERED.A111573

Identifiers

DOI

10.1186/1471-2156-10-81

1 reference

Dimensions Publication ID

27 July 2017

0 references

1 reference

27 July 2017

1 reference