MACSIMS: multiple alignment of complete sequences information management system (Q33247635)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

title

MACSIMS: multiple alignment of complete sequences information management system (English)

1 reference

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25 December 2019

1 reference

4

1 reference

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25 December 2019

Geoffrey J. Barton

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

6

Frédéric Plewniak

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

author name string

Julie D Thompson

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

Arnaud Muller

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

Andrew Waterhouse

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

Olivier Poch

7

1 reference

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25 December 2019

publication date

23 June 2006

1 reference

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25 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

page(s)

318

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 2.0 Generic

25 December 2019

copyright license

start time

23 June 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

publication type of scholarly work

review article

1 reference

SPINE bioinformatics and data-management aspects of high-throughput structural biology

cites work

1 reference

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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14 July 2018

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ProbCons: Probabilistic consistency-based multiple sequence alignment

14 July 2018

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GeneNotes--a novel information management software for biologists

14 July 2018

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GOAnno: GO annotation based on multiple alignment

14 July 2018

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InterPro, progress and status in 2005

14 July 2018

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Relationship between multiple sequence alignments and quality of protein comparative models

14 July 2018

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MOLE: a data management application based on a protein production data model

14 July 2018

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MyHits: a new interactive resource for protein annotation and domain identification

14 July 2018

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Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence

14 July 2018

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

14 July 2018

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LEON: multiple aLignment Evaluation Of Neighbours

14 July 2018

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The Jalview Java alignment editor

14 July 2018

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The Pfam protein families database

14 July 2018

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Better prediction of sub-cellular localization by combining evolutionary and structural information

14 July 2018

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GIMS: an integrated data storage and analysis environment for genomic and functional data

14 July 2018

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PipeAlign: A new toolkit for protein family analysis

14 July 2018

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Protein family annotation in a multiple alignment viewer

14 July 2018

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Computational systems biology

14 July 2018

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Dictionary-driven protein annotation

14 July 2018

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MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

14 July 2018

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14 July 2018

The Protein Data Bank

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Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption.

14 July 2018

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Multiple alignment of complete sequences (MACS) in the post-genomic era.

14 July 2018

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A global compositional complexity measure for biological sequences: AT-rich and GC-rich genomes encode less complex proteins

14 July 2018

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

14 July 2018

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Identification and application of the concepts important for accurate and reliable protein secondary structure prediction

14 July 2018

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14 July 2018

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Characterization and modeling of membrane proteins using sequence analysis

14 July 2018

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Prediction of protein secondary structure and active sites using the alignment of homologous sequences

14 July 2018

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Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins

14 July 2018

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Predicting coiled coils from protein sequences

14 July 2018

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Mutation and polymorphism spectrum of the GALNS gene in mucopolysaccharidosis IVA (Morquio A).

14 July 2018

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Enhanced statistics for local alignment of multiple alignments improves prediction of protein function and structure

31 October 2018

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The SRS 3D module: integrating structures, sequences and features

31 October 2018

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Statistically rigorous automated protein annotation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1539025

Automatic annotation of protein function based on family identification

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1539025

RASCAL: rapid scanning and correction of multiple sequence alignments

31 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1539025

The CXXC motif: a rheostat in the active site

31 October 2018

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BAliBASE 3.0: latest developments of the multiple sequence alignment benchmark

31 October 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/16792820

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Secator: a program for inferring protein subfamilies from phylogenetic trees

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16792820

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Towards a reliable objective function for multiple sequence alignments 1 1Edited by J. Karn

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16792820

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

dictyBase: a new Dictyostelium discoideum genome database

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COCI

https://opencitations.net/index/api/v1/references/10.1186/1471-2105-7-318

19 October 2025

Identifiers

DOI

10.1186/1471-2105-7-318

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/ThompsonMWPBPP06

25 December 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16792820%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

PubMed publication ID

16792820

1 reference