Issues in searching molecular sequence databases (Q30421088)

21 June 2017

title

Issues in searching molecular sequence databases (English)

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21 June 2017

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Altschul SF

1

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21 June 2017

Boguski MS

series ordinal

2

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21 June 2017

Gish W

series ordinal

3

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21 June 2017

Wootton JC

series ordinal

4

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21 June 2017

publication date

1 February 1994

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21 June 2017

language of work or name

0 references

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21 June 2017

volume

6

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21 June 2017

issue

2

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21 June 2017

page(s)

119-129

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publication type of scholarly work

21 June 2017

review article

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Identification of protein coding regions by database similarity search

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Detecting frame shifts by amino acid sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Empirical and structural models for insertions and deletions in the divergent evolution of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

dbEST--database for "expressed sequence tags"

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Sequence analysis by electronic mail server

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Human genes containing polymorphic trinucleotide repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Identification of mRNAs associated with programmed cell death in immature thymocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Solution structure of the DNA-binding domain of the oestrogen receptor

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Signal transduction. How receptors turn Ras on.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Proteins regulating Ras and its relatives

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

The SH2 and SH3 domains of mammalian Grb2 couple the EGF receptor to the Ras activator mSos1

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

The PH domain: a common piece in the structural patchwork of signalling proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

Amino acid substitution matrices from an information theoretic perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

A protein alignment scoring system sensitive at all evolutionary distances

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Improved sensitivity of nucleic acid database searches using application-specific scoring matrices

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Applications and statistics for multiple high-scoring segments in molecular sequences

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The statistical distribution of nucleic acid similarities

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

A nonlinear measure of subalignment similarity and its significance levels

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Maximum-likelihood estimation of the statistical distribution of Smith-Waterman local sequence similarity scores

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

On the Theory and Computation of Evolutionary Distances

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Identification of common molecular subsequences

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

A new algorithm for best subsequence alignments with application to tRNA-rRNA comparisons

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Rapid and sensitive protein similarity searches

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Improved tools for biological sequence comparison

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Protein database searches for multiple alignments

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

A sensitive procedure to compare amino acid sequences

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Tests for comparing related amino-acid sequences. Cytochrome c and cytochrome c551

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Aligning amino acid sequences: Comparison of commonly used methods

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Amino acid substitutions in structurally related proteins. A pattern recognition approach. Determination of a new and efficient scoring matrix

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Exhaustive matching of the entire protein sequence database

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Amino acid substitution matrices from protein blocks

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Performance evaluation of amino acid substitution matrices

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Phase transitions in sequence matches and nucleic acid structure

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Optimal sequence alignments

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

An improved algorithm for matching biological sequences

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Optimal sequence alignment using affine gap costs

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Sequence comparison with concave weighting functions

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Analysis of insertions/deletions in protein structures

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

https://api.crossref.org/works/10.1038%2FNG0294-119

1 reference

7 January 2021

The EMBL data library

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The PIR-International databases.

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Complementary DNA sequencing: expressed sequence tags and human genome project

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Finding new genes faster than ever

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The EST express gathers speed

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Construction of validated, non-redundant composite protein sequence databases

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The National Center for Biotechnology Information

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The SWISS-PROT protein sequence data bank, recent developments

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Ancient conserved regions in new gene sequences and the protein databases

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Charge configurations in viral proteins

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Chance and statistical significance in protein and DNA sequence analysis

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Methods and algorithms for statistical analysis of protein sequences

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Prototypic sequences for human repetitive DNA

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

A new five-year plan for the U.S. Human Genome Project

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

An Extreme Value Theory for Sequence Matching

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The Erdős-Rényi Strong Law for Pattern Matching with a Given Proportion of Mismatches

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The Drosophila 110-kDa transcription factor TFIID subunit directly interacts with the N-terminal region of the 230-kDa subunit

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The many roads that lead to Ras.

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

The nucleosomal core histone octamer at 3.1 A resolution: a tripartite protein assembly and a left-handed superhelix

1 reference

https://api.crossref.org/works/10.1038%2FNG0294-119

7 January 2021

Identifiers

DOI

10.1038/NG0294-119

1 reference

21 June 2017

1 reference