Architectures of somatic genomic rearrangement in human cancer amplicons at sequence-level resolution (Q24676904)

18

Richard Wooster

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Michael Andrew Quail

12

Michael Quail

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P. Andrew Futreal

19

P Andrew Futreal

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Andrew Menzies

8

Andrew Menzies

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Michael Stratton

20

Michael R Stratton

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Jane Rogers

17

Jane Rogers

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Thomas Santarius

2

Thomas Santarius

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author name string

Graham R Bignell

1

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Jessica C M Pole

3

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Adam P Butler

4

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Janet Perry

5

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Erin Pleasance

6

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Chris Greenman

7

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Sheila Taylor

9

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Peter Campbell

11

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Bob Plumb

13

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Lucy Matthews

14

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Kirsten McLay

15

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Paul A W Edwards

The Stability of Broken Ends of Chromosomes in Zea Mays.

16

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publication date

September 2007

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language of work or name

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17

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issue

9

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page(s)

1296-303

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cites work

1 reference

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A census of human cancer genes

7 April 2017

1 reference

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End-sequence profiling: sequence-based analysis of aberrant genomes

7 April 2017

1 reference

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BLAT—The BLAST-Like Alignment Tool

7 April 2017

1 reference

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Initial sequencing and analysis of the human genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Patterns of somatic mutation in human cancer genomes

7 April 2017

1 reference

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SSAHA: a fast search method for large DNA databases

7 April 2017

1 reference

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The breakage-fusion-bridge (BFB) cycle as a mechanism for generating genetic heterogeneity in osteosarcoma

7 April 2017

1 reference

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Decoding the fine-scale structure of a breast cancer genome and transcriptome

28 September 2017

1 reference

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Herceptin: mechanisms of action and resistance

28 September 2017

1 reference

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Distribution of breakpoints on chromosome 18 in breast, colorectal, and pancreatic carcinoma cell lines

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Mechanisms of eukaryotic DNA double strand break repair

28 September 2017

1 reference

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Manifestation, mechanisms and mysteries of gene amplifications

28 September 2017

1 reference

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Translocation-excision-deletion-amplification mechanism leading to nonsyntenic coamplification of MYC and ATBF1.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

An integrated mBAND and submegabase resolution tiling set (SMRT) CGH array analysis of focal amplification, microdeletions, and ladder structures consistent with breakage-fusion-bridge cycle events in osteosarcoma

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Alternative mechanisms of gene amplification in human cancers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Molecular structure of double-minute chromosomes bearing amplified copies of the epidermal growth factor receptor gene in gliomas

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

High-resolution analysis of DNA copy number using oligonucleotide microarrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Structure of a palindromic amplicon junction implicates microhomology-mediated end joining as a mechanism of sister chromatid fusion during gene amplification

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Translocation and gross deletion breakpoints in human inherited disease and cancer I: Nucleotide composition and recombination-associated motifs

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Chromosome instability as a result of double-strand breaks near telomeres in mouse embryonic stem cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Amplification of oncogenes revisited: from expression profiling to clinical application

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Oncogene amplification in solid tumors

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

A new role for hypoxia in tumor progression: induction of fragile site triggering genomic rearrangements and formation of complex DMs and HSRs

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Cytogenetic evolution of mycn and mdm2 amplification in the neuroblastoma ls tumour and its cell line

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Chromosome abnormalities in 10 lung cancer cell lines of the NCI-H series analyzed with spectral karyotyping

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Fine structure of translocation breakpoints in leukemic blasts with chromosomal translocation t(4;11): the DNA damage-repair model of translocation

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Amplification of the N-myc gene in human neuroblastomas: tandemly repeated amplicons within homogeneously staining regions on different chromosomes with the retention of single copy gene at the resident site

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Genomic organization of amplified MYC genes suggests distinct mechanisms of amplification in tumorigenesis

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

A modular, positive selection bacterial artificial chromosome vector with multiple cloning sites.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950898

Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection

28 November 2018

1 reference

12 December 2020

Genomic DNA is captured and amplified during double-strand break (DSB) repair in human cells

1 reference

12 December 2020

Identification of amplified DNA sequences in breast cancer and their organization within homogeneously staining regions

1 reference

12 December 2020

A role for common fragile site induction in amplification of human oncogenes

1 reference

12 December 2020

Identifiers

DOI

10.1101/GR.6522707

1 reference

1 reference

1 reference

PubMed publication ID

17675364

1 reference