Prokaryotic introns and inteins: a panoply of form and function (Q24671957)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7608058%20AND%20SRC:MED&resulttype=core&format=json

21 October 2019

title

Prokaryotic introns and inteins: a panoply of form and function (English)

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21 October 2019

4

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21 October 2019

author name string

M Belfort

series ordinal

1

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21 October 2019

M E Reaban

series ordinal

2

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21 October 2019

T Coetzee

series ordinal

3

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21 October 2019

publication date

1 July 1995

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21 October 2019

language of work or name

English

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published in

Journal of Bacteriology

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21 October 2019

volume

177

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21 October 2019

issue

14

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21 October 2019

page(s)

3897-3903

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publication type of scholarly work

21 October 2019

review article

1 reference

DNA substrate specificity and cleavage kinetics of an archaeal homing-type endonuclease from Pyrobaculum organotrophum

cites work

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Selfish DNA: a sexually-transmitted nuclear parasite

7 April 2017

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Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

7 April 2017

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Intervening sequences in an Archaea DNA polymerase gene

7 April 2017

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Protein splicing of the yeast TFP1 intervening protein sequence: a model for self-excision

7 April 2017

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Introns as mobile genetic elements

7 April 2017

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Selfish DNA: the ultimate parasite

7 April 2017

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Comparative and functional anatomy of group II catalytic introns—a review

7 April 2017

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The excision of intervening sequences from Salmonella 23S ribosomal RNA

7 April 2017

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Protein splicing converts the yeast TFP1 gene product to the 69-kD subunit of the vacuolar H(+)-adenosine triphosphatase

7 April 2017

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Selfish genes, the phenotype paradigm and genome evolution

7 April 2017

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Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

7 April 2017

1 reference

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The curious case of protein splicing: mechanistic insights suggested by protein semisynthesis

7 April 2017

1 reference

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Group I and group II introns

28 September 2017

1 reference

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A site-specific endonuclease encoded by a typical archaeal intron

28 September 2017

1 reference

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Intervening sequence with conserved open reading frame in eubacterial 23S rRNA genes

28 September 2017

1 reference

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Protein splicing: excision of intervening sequences at the protein level

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

In vitro protein splicing of purified precursor and the identification of a branched intermediate

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Evidence for a group II intron in Escherichia coli inserted into a highly conserved reading frame associated with mobile DNA sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Protein splicing elements: inteins and exteins--a definition of terms and recommended nomenclature

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

The ins and outs of protein splicing elements

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Phylogenetic and molecular characterization of a 23S rRNA gene positions the genus Campylobacter in the epsilon subdivision of the Proteobacteria and shows that the presence of transcribed spacers is common in Campylobacter spp.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Evolution of mobile group I introns: recognition of intron sequences by an intron-encoded endonuclease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Protein splicing: an analysis of the branched intermediate and its resolution by succinimide formation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

An intron in the thymidylate synthase gene of Bacillus bacteriophage beta 22: evidence for independent evolution of a gene, its group I intron, and the intron open reading frame

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Protein-based phylogenies support a chimeric origin for the eukaryotic genome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

A mutation in ribosomal protein L9 affects ribosomal hopping during translation of gene 60 from bacteriophage T4.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Mobile group II introns of yeast mitochondrial DNA are novel site-specific retroelements

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Homing of a group II intron in yeast mitochondrial DNA is accompanied by unidirectional co-conversion of upstream-located markers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

An intervening sequence (IVS) in the 16S rRNA gene of the eubacterium Helicobacter canis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Evidence of selection for protein introns in the recAs of pathogenic mycobacteria

28 September 2017

1 reference

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Intervening sequence in the thymidylate synthase gene of bacteriophage T4

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Putative introns in tRNA genes of prokaryotes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

A tRNA(Trp) intron endonuclease from Halobacterium volcanii. Unique substrate recognition properties

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Molecular genetics of group I introns: RNA structures and protein factors required for splicing--a review

28 September 2017

1 reference

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Bacteriophage introns: parasites within parasites?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Involvement of aminoacyl-tRNA synthetases and other proteins in group I and group II intron splicing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

A self-splicing group I intron in the DNA polymerase gene of Bacillus subtilis bacteriophage SPO1.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

28 September 2017

Archaeal rRNA operons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Ribosomal RNA introns in archaea and evidence for RNA conformational changes associated with splicing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Self-splicing introns in prokaryotes: migrant fossils?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Self-splicing introns in tRNA genes of widely divergent bacteria

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Homing of a DNA endonuclease gene by meiotic gene conversion in Saccharomyces cerevisiae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

The ribosomal RNA gene region in Acanthamoeba castellanii mitochondrial DNA. A case of evolutionary transfer of introns between mitochondria and plastids?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Escherichia coli proteins, including ribosomal protein S12, facilitate in vitro splicing of phage T4 introns by acting as RNA chaperones

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

An Expanding Universe of Introns

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Transcription and excision of a large intron in the tRNATrp gene of an archaebacterium, Halobacterium volcanii

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Multiple self-splicing introns in bacteriophage T4: evidence from autocatalytic GTP labeling of RNA in vitro

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

A persistent untranslated sequence within bacteriophage T4 DNA topoisomerase gene 60.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

A nascent peptide is required for ribosomal bypass of the coding gap in bacteriophage T4 gene 60.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

An ancient group I intron shared by eubacteria and chloroplasts

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Retronphage φR73: an E. coli Phage That Contains a Retroelement and Integrates Into a tRNA Gene

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Recognition of exon-intron boundaries by the Halobacterium volcanii tRNA intron endonuclease

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Protein splicing in the maturation of M. tuberculosis recA protein: a mechanism for tolerating a novel class of intervening sequence

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Trans and cis requirements for intron mobility in a prokaryotic system

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Activation of the catalytic core of a group I intron by a remote 3' splice junction

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Transposition of a group II intron

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

A chloroplast group I intron undergoes the first step of reverse splicing into host cytoplasmic 5.8 S rRNA. Implications for intron-mediated RNA recombination, intron transposition and 5.8 S rRNA structure

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Multiple group II self-splicing introns in mobile DNA from Escherichia coli.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Purification and characterization of two forms of I-DmoI, a thermophilic site-specific endonuclease encoded by an archaeal intron.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Group II self-splicing introns in bacteria

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

Splicing of the rolA transcript of Agrobacterium rhizogenes in Arabidopsis

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177115

The uncertain origin of introns

28 November 2018

1 reference

12 December 2020

Novel splicing mechanism for the ribosomal RNA intron in the archaebacterium Desulfurococcus mobilis

1 reference

12 December 2020

RNA-catalysed synthesis of complementary-strand RNA

1 reference

12 December 2020

Bacterial origin of a chloroplast intron: conserved self-splicing group I introns in cyanobacteria

1 reference

12 December 2020

1 reference

12 December 2020

Frameshifting in the expression of the E. coli trpR gene occurs by the bypassing of a segment of its coding sequence

1 reference

12 December 2020

Mobile introns and inteins: friend or foe?

1 reference

12 December 2020

Transposition of group II intron al1 in yeast and invasion of mitochondrial genes at new locations

1 reference

12 December 2020

10.1128/JB.177.14.3897-3903.1995

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7608058%20AND%20SRC:MED&resulttype=core&format=json

release_i65tabv73fcyfl47rgzw2kn4he

21 October 2019

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/i65tabv73fcyfl47rgzw2kn4he

24 November 2022

mapped directly with Wikidata item

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7608058%20AND%20SRC:MED&resulttype=core&format=json

21 October 2019

PubMed publication ID

7608058

1 reference