Fluctuations in superhelical DNA (Q24633322)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A155809

13 May 2022

viral DNA

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13 May 2022

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13 May 2022

author name string

A. V. Vologodskii

1

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13 May 2022

A. V. Lukashin

2

1 reference

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13 May 2022

V. V. Anshelevich

3

1 reference

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13 May 2022

M. D. Frank-Kamenetskii

4

1 reference

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https://europepmc.org/articles/PMC327745

13 May 2022

publication date

March 1979

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language of work or name

English

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work available at URL

1 reference

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https://europepmc.org/articles/PMC327745?pdf=render

13 May 2022

1 reference

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http://academic.oup.com/nar/article-pdf/6/3/967/6962997/6-3-967.pdf

13 May 2022

1 reference

https://api.crossref.org/works/10.1093/NAR/6.3.967

Free energy of imperfect nucleic acid helices. II. Small hairpin loops

13 May 2022

published in

Nucleic Acids Research

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volume

6

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issue

3

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page(s)

967-82

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Effect of Circularity and Superhelicity on Transcription from Bacteriophage λ DNA

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Cleavage of circular, superhelical simian virus 40 DNA to a linear duplex by S1 nuclease

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Molecular mechanism for genetic recombination

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Introduction of interrupted secondary structure in supercoiled DNA as a function of superhelix density: consideration of hairpin structures in superhelical DNA

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Action of nicking-closing enzyme on supercoiled and nonsupercoiled closed circular DNA: formation of a Boltzmann distribution of topological isomers

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Carbodiimide modification of superhelical PM2 DNA: considerations regarding reaction at unpaired bases and the unwinding of superhelical DNA with chemical probes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Novobiocin and coumermycin inhibit DNA supercoiling catalyzed by DNA gyrase

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Theoretical melting profiles and denaturation maps of DNA with known sequence: fdDNA

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Structure and reactions of closed duplex DNA

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

DNA gyrase: an enzyme that introduces superhelical turns into DNA

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Chemical modification of simian virus 40 DNA by reaction with a water-soluble carbodiimide

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Conformational fluctuations of DNA helix

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

T antigen binds to simian virus 40 DNA at the origin of replication

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Rupture of base pairing in double-stranded poly(riboadenylic acid)·poly(ribouridylic acid) by formaldehyde: medium chain lengths

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Helix formation by d(TA) oligomers. II. Analysis of the helix-coli transitions of linear and circular oligomers

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Partial alteration of secondary structure in native superhelical DNA.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Effects of supercoiling on transcription from bacteriophage PM2 deoxyribonucleic acid

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Interactions between twisted DNAs and enzymes: the effects of superhelical turns

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Sensitivity of superhelical DNA to a single-strand specific endonuclease

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Fluctuational opening of the double helix as revealed by theoretical and experimental study of DNA interaction with formaldehyde

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=327745

Interaction of closed circular DNA with intercalative dyes. II. The free energy of superhelix formation in SV40 DNA

30 May 2018

1 reference

12 December 2020

Characterization of the single-strand-specific nuclease S1 activity on double-stranded supercoiled polyoma DNA

1 reference

12 December 2020

Stability of RNA hairpin loops: A6-Cm-U6

1 reference

12 December 2020

Template activities of the phi X-174 replicative allomorphic deoxyribonucleic acids

1 reference

12 December 2020

Characterization by electron microscopy of the complex formed between T4 bacteriophage gene 32-protein and DNA

1 reference

12 December 2020

Direct comparison of theoretical and experimental melting profiles for RFII ΦX174 DNA

1 reference

12 December 2020

The relation of single-stranded regions in bacteriophage PM2 supercoiled DNA to the early melting sequences

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/6.3.967

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