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A higher-order generalized singular value decomposition for comparison of global mRNA expression from multiple organisms (Q21560903)

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A Higher-Order Generalized Singular Value Decomposition for Comparison of Global mRNA Expression from Multiple Organisms

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English	A higher-order generalized singular value decomposition for comparison of global mRNA expression from multiple organisms	scientific article	A Higher-Order Generalized Singular Value Decomposition for Comparison of Global mRNA Expression from Multiple Organisms

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scholarly article

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A higher-order generalized singular value decomposition for comparison of global mRNA expression from multiple organisms (English)

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multi-tensor decomposition

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Sri Priya Ponnapalli

1

object named as

Sri Priya Ponnapalli

author given names

Sri Priya

author last names

Ponnapalli

2 references

10.1371/JOURNAL.PONE.0028072

PubMed publication ID

5 September 2022

Michael Saunders

2

object named as

Michael A Saunders

author given names

Michael A

author last names

Saunders

2 references

10.1371/JOURNAL.PONE.0018768

PubMed publication ID

5 September 2022

Charles F. Van Loan

3

object named as

Charles F Van Loan

author given names

Charles F

author last names

Van Loan

2 references

10.1371/JOURNAL.PONE.0018768

PubMed publication ID

5 September 2022

4

subject has role

corresponding author

principal investigator

object named as

Orly Alter

author given names

Orly

author last names

Alter

2 references

10.1371/JOURNAL.PONE.0018768

PubMed publication ID

5 September 2022

publication date

2011

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language of work or name

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external data available at URL

https://alterlab.org/HO_GSVD/

Alter Lab (English)

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6

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12

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e28072

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copyright license

Creative Commons Attribution 4.0 International

22 December 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

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Global effects of DNA replication and DNA replication origin activity on eukaryotic gene expression

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245232

19 March 2017

A tensor higher-order singular value decomposition for integrative analysis of DNA microarray data from different studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245232

19 March 2017

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

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19 March 2017

The cell cycle-regulated genes of Schizosaccharomyces pombe

1 reference

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19 March 2017

Integrative analysis of genome-scale data by using pseudoinverse projection predicts novel correlation between DNA replication and RNA transcription

1 reference

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19 March 2017

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

1 reference

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The yeast ATP binding cassette (ABC) protein genes PDR10 and PDR15 are novel targets for the Pdr1 and Pdr3 transcriptional regulators

1 reference

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19 March 2017

Complete inventory of the yeast ABC proteins

1 reference

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The Saccharomyces cerevisiae PLB1 gene encodes a protein required for lysophospholipase and phospholipase B activity

1 reference

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19 March 2017

Systematic determination of genetic network architecture

1 reference

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19 March 2017

A Genome-Wide Transcriptional Analysis of the Mitotic Cell Cycle

1 reference

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7 April 2017

Identification of genes periodically expressed in the human cell cycle and their expression in tumors

1 reference

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7 April 2017

A minimal gene set for cellular life derived by comparison of complete bacterial genomes

1 reference

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7 April 2017

Cyclebase.org: version 2.0, an updated comprehensive, multi-species repository of cell cycle experiments and derived analysis results

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245232

10 May 2017

Co-evolution of transcriptional and post-translational cell-cycle regulation

1 reference

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10 May 2017

Cross species analysis of microarray expression data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245232

12 September 2017

Discovery of principles of nature from mathematical modeling of DNA microarray data

1 reference

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12 September 2017

Reconstructing the pathways of a cellular system from genome-scale signals by using matrix and tensor computations

1 reference

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12 September 2017

Generalized singular value decomposition for comparative analysis of genome-scale expression data sets of two different organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245232

12 September 2017

Stationary phase in the yeast Saccharomyces cerevisiae

1 reference

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12 September 2017

A single fission yeast mitotic cyclin B p34cdc2 kinase promotes both S-phase and mitosis in the absence of G1 cyclins

1 reference

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27 September 2017

B-type cyclins regulate G1 progression in fission yeast in opposition to the p25rum1 cdk inhibitor

1 reference

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27 September 2017

Interaction of the yeast pleiotropic drug resistance genes PDR1 and PDR5

1 reference

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30 May 2018

Towards a Generalized Singular Value Decomposition

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028072

21 January 2018

A Multilinear Singular Value Decomposition

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028072

21 January 2018

Periodic gene expression program of the fission yeast cell cycle.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028072

21 January 2018

Expression regulation of the yeast PDR5 ATP-binding cassette (ABC) transporter suggests a role in cellular detoxification during the exponential growth phase

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028072

21 January 2018

Putative role for ABC multidrug exporters in yeast quorum sensing.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028072

21 January 2018

The ATP-binding cassette multidrug transporter Snq2 of Saccharomyces cerevisiae: a novel target for the transcription factors Pdr1 and Pdr3

1 reference

https://pubmed.ncbi.nlm.nih.gov/22216090

12 December 2020

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10.1371/JOURNAL.PONE.0028072

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2011PLoSO...628072P

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OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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