Bioclipse 2: a scriptable integration platform for the life sciences (Q21284369)

18 August 2022

9

Egon L Willighagen

Egon L

Willighagen

1 reference

18 August 2022

1

Ola Spjuth

Ola

Spjuth

1 reference

18 August 2022

11

Jarl ES Wikberg

Jarl ES

Wikberg

1 reference

18 August 2022

4

Martin Eklund

Martin

Eklund

1 reference

18 August 2022

2

Jonathan Alvarsson

Jonathan

Alvarsson

1 reference

18 August 2022

3

Arvid Berg

Arvid

Berg

1 reference

18 August 2022

8

Johannes Wagener

Johannes

Wagener

1 reference

18 August 2022

5

Stefan Kuhn

Stefan

Kuhn

1 reference

18 August 2022

6

Carl Mäsak

Carl

Mäsak

1 reference

18 August 2022

7

Gilleain Torrance

Gilleain

Torrance

1 reference

1049578328

full work available at URL

18 August 2022

language of work or name

English

0 references

publication date

2009

0 references

number of pages

5

0 references

http://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-10-397

0 references

published in

BMC Bioinformatics

0 references

volume

10

0 references

page(s)

397

0 references

issue

1

0 references

copyright license

Creative Commons Attribution 2.0 Generic

start time

1 December 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

describes a project that uses

Cytoscape

object named as

Cytoscape

2 references

Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-10-397

0 references

cites work

XMPP for cloud computing in bioinformatics supporting discovery and invocation of asynchronous web services

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

BioJava: an open-source framework for bioinformatics

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Bioclipse: an open source workbench for chemo- and bioinformatics

19 March 2017

has goal

extends the cited work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Kalign--an accurate and fast multiple sequence alignment algorithm

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Cytoscape: a software environment for integrated models of biomolecular interaction networks

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

The Blue Obelisk-interoperability in chemical informatics

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

NMRShiftDB - Constructing a Free Chemical Information System with Open-Source Components

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Processing CML conventions in Java

19 March 2017

0 references

Recent Developments of the Chemistry Development Kit (CDK) - An Open-Source Java Library for Chemo- and Bioinformatics

has goal

uses method in cited work

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

19 March 2017

CiteULike CiTO annotations

Taverna: a tool for the composition and enactment of bioinformatics workflows

2022

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Web services at the European bioinformatics institute

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Evolutionary-Algorithm-Based Strategy for Computer-Assisted Structure Elucidation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

New strategies in drug discovery

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

SENECA: A Platform-Independent, Distributed, and Parallel System for Computer-Assisted Structure Elucidation in Organic Chemistry

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Generating conformer ensembles using a multiobjective genetic algorithm.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799422

Chemical Markup, XML and the World-Wide Web. 2. Information Objects and the CMLDOM

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19958528

12 December 2020

inferred from PubMed ID database lookup

The design and realisation of the Virtual Research Environment for social sharing of workflows

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-10-397

7 January 2021

inferred from DOI database lookup

JChemPaint - Using the Collaborative Forces of the Internet to Develop a Free Editor for 2D Chemical Structures

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-10-397

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1186/1471-2105-10-397

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4163164

DBLP publication ID

journals/bmcbi/SpjuthABEKMTWWSW09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

OpenCitations bibliographic resource ID

1049578328

0 references

4163164

1 reference